The ClinGen Evidence Repository is an FDA-recognized human genetic variant database containing expert-curated assertions regarding variants' pathogenicity and supporting evidence summaries. [Disclaimer]
  • No CSPEC related information was provided by the message!

  • No Criteria Specification was provided in the publication event for the variant classifaction.
  • The Criteria Specification shown below is a best-estimate based on the VCEP, gene, disease, and publication date.

Variant: NM_001323289.2(CDKL5):c.2388C>T (p.Ser796=)

CA233657

166821 (ClinVar)

Gene: CDKL5 (HGNC:6792)
Condition: CDKL5 disorder (MONDO:0100039)
Inheritance Mode: X-linked inheritance
UUID: 64f0a058-01b0-4b3f-8cbc-0957e3e5ea8d
Approved on: 2023-04-14
Published on: 2023-06-16

HGVS expressions

NM_001323289.2:c.2388C>T
NM_001323289.2(CDKL5):c.2388C>T (p.Ser796=)
NC_000023.11:g.18625139C>T
CM000685.2:g.18625139C>T
NC_000023.10:g.18643259C>T
CM000685.1:g.18643259C>T
NC_000023.9:g.18553180C>T
NG_008475.1:g.204535C>T
ENST00000623535.2:c.2388C>T
ENST00000635828.1:c.2388C>T
ENST00000674046.1:c.2511C>T
ENST00000379989.6:c.2388C>T
ENST00000379996.7:c.2388C>T
ENST00000623535.1:n.2388C>T
NM_001037343.1:c.2388C>T
NM_003159.2:c.2388C>T
NM_001323289.1:c.2388C>T
NM_001037343.2:c.2388C>T
NM_003159.3:c.2388C>T
More

Likely Benign

Met criteria codes 2
BP5 BS2

Evidence Links 0

Expert Panel

Criteria Specification Information

Criteria Specifications for this VCEP
Evidence submitted by expert panel
Rett and Angelman-like Disorders VCEP
The p.Ser796= variant is observed in at least 2 unaffected individuals (GeneDx internal database) (BS2). The p.Ser796= variant is found in a patient with an alternate molecular basis of disease (GeneDx internal database)(BP5). In summary, the p.Ser796= variant in CDKL5 is classified as likely benign based on the ACMG/AMP criteria (BS2, BP5).
Met criteria codes
BP5
The p.Ser796= variant is found in a patient with an alternate molecular basis of disease (GeneDx internal database)(BP5).
BS2
The p.Ser796= variant is observed in at least 2 unaffected individuals (GeneDx internal database) (BS2).
Curation History
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