The ClinGen Evidence Repository is an FDA-recognized human genetic variant database containing expert-curated assertions regarding variants' pathogenicity and supporting evidence summaries. [Disclaimer]
  • Despite there being a valid 'cspec' property in the messages there's a discrepancy in message contents and CSPEC data: * Message Gene: MT-ATP6 CSPEC Genes: [] * Message MONDOs: MONDO:0044970 CSPEC MONDO: []
  • No CSPEC computed assertion could be determined for this classification!


Variant: NC_012920.1(MT-ATP8):m.8529G>A

CA120593

9639 (ClinVar)

Gene: MT-ATP6
Condition: mitochondrial disease
Inheritance Mode: Mitochondrial inheritance
UUID: 5c0ac994-93c4-40cc-9d0d-cfcd6d271c84
Approved on: 2024-08-12
Published on: 2025-04-30

HGVS expressions

NC_012920.1:m.8529G>A
J01415.2:m.8529G>A
ENST00000361851.1:c.164G>A
ENST00000361899.2:c.3G>A
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Uncertain Significance

Met criteria codes 2
PM2_Supporting PS3_Supporting
Not Met criteria codes 6
PS1 PS2 PS4 PP1 PP3 PM6

Evidence Links 0

Expert Panel

Criteria Specification Information

Criteria Specification: ClinGen Mitochondrial Disease Nuclear and Mitochondrial Expert Panel Specifications to the ACMG/AMP Variant Interpretation Guidelines Version 1_mtDNA

Criteria Specification Approval History
Criteria Specifications for this VCEP
Evidence submitted by expert panel
Mitochondrial Diseases VCEP
The m.8529G>A variant (resulting in p.Trp55X in MT-ATP8 and p.M1M in MT-ATP6) has been reported in one individual with primary mitochondrial disease (PMID: 17953552). This is a male with hypertrophic cardiomyopathy, gross motor delay, exercise intolerance, dysarthria, ataxia, ophthalmoplegia, and elevated cerebrospinal fluid lactate. The variant was present at homoplasmy in muscle and fibroblasts. Although not included in this curation given additional details are not available, we are aware of one additional case by personal communication with ataxia and spastic paraplegia. There are no reported de novo occurrences of this variant to our knowledge. There are no reports of large families with this variant segregating with disease. This variant is absent in the GenBank dataset, Helix dataset, and gnomAD v3.1.2 (PM2_supporting). There are no in silico predictors for this type of variant in mitochondrial DNA. Cybrid studies showed that the homoplasmic mutant clones had statistically significant decreases in Complex V activity (PS3_supporting, PMID: 17954552). In summary, this variant meets criteria to be classified as uncertain significance for primary mitochondrial disease inherited in a mitochondrial manner. This classification was approved by the NICHD/NINDS U24 ClinGen Mitochondrial Disease Variant Curation Expert Panel on August 12, 2024. Mitochondrial DNA-specific ACMG/AMP criteria applied (PMID: 32906214): PS3_supporting, PM2_supporting.
Met criteria codes
PM2_Supporting
This variant is absent in the GenBank dataset, Helix dataset, and gnomAD v3.1.2 (PM2_supporting).
PS3_Supporting
Cybrid studies showed that the homoplasmic mutant clones had statistically significant decreases in Complex V activity (PS3_supporting, PMID: 17954552).
Not Met criteria codes
PS1
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
PS2
There are no reported de novo occurrences of this variant to our knowledge.
PS4
The m.8529G>A variant (resulting in p.Trp55X in MT-ATP8 and p.M1M in MT-ATP6) has been reported in one individual with primary mitochondrial disease (PMID: 17953552). This is a male with hypertrophic cardiomyopathy, gross motor delay, exercise intolerance, dysarthria, ataxia, ophthalmoplegia, and elevated cerebrospinal fluid lactate. The variant was present at homoplasmy in muscle and fibroblasts. Although not included in this curation given additional details are not available, we are aware of one additional case by personal communication with ataxia and spastic paraplegia.
PP1
There are no reports of large families with this variant segregating with disease.
PP3
There are no in silico predictors for this type of variant in mitochondrial DNA.
PM6
There are no reported de novo occurrences of this variant to our knowledge.
Curation History
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