The ClinGen Evidence Repository is an FDA-recognized human genetic variant database containing expert-curated assertions regarding variants' pathogenicity and supporting evidence summaries. [Disclaimer]


Variant: NM_024675.4(PALB2):c.1748T>G (p.Leu583Trp)

CA166979

141972 (ClinVar)

Gene: PALB2
Condition: hereditary breast cancer
Inheritance Mode: Autosomal dominant inheritance
UUID: 784d2c84-8207-4f86-908e-4646f2ce3c66
Approved on: 2023-04-05
Published on: 2023-04-07

HGVS expressions

NM_024675.4:c.1748T>G
NM_024675.4(PALB2):c.1748T>G (p.Leu583Trp)
NC_000016.10:g.23630406A>C
CM000678.2:g.23630406A>C
NC_000016.9:g.23641727A>C
CM000678.1:g.23641727A>C
NC_000016.8:g.23549228A>C
NG_007406.1:g.15952T>G
ENST00000261584.9:c.1748T>G
ENST00000261584.8:c.1748T>G
ENST00000565038.1:n.87-1131T>G
ENST00000568219.5:c.863T>G
NM_024675.3:c.1748T>G
More

Uncertain Significance

Met criteria codes 1
BP1
Not Met criteria codes 3
PM2 BA1 BS1

Evidence Links 0

Expert Panel

Criteria Specification Information

Criteria Specification: ClinGen Hereditary Breast, Ovarian and Pancreatic Cancer Expert Panel Specifications to the ACMG/AMP Variant Interpretation Guidelines for PALB2 Version 1.0.0

Criteria Specification Approval History
Criteria Specifications for this VCEP
Evidence submitted by expert panel
Hereditary Breast, Ovarian and Pancreatic Cancer VCEP
The c.1748T>G (p.Leu583Trp) variant in PALB2 is a missense variant predicted to cause a substitution of leucine by tryptophan at amino acid 583 (p.Leu583Trp). This variant has a minor allele frequency in gnomAD v2.1.1 of 0.000044 in the non-Finnish European population (PM2_Supporting, BS1, and BA1 are not met). PALB2, in which the variant was identified, is defined by the HBOP VCEP as a gene for which primarily truncating variants are known to cause disease. In summary, this variant meets the criteria to be classified as a variant of uncertain significance for autosomal dominant hereditary breast and pancreatic cancer and autosomal recessive FANCN based on the ACMG/AMP criteria applied as specified by the HBOP VCEP. (BP1)
Met criteria codes
BP1
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
Not Met criteria codes
PM2
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
BA1
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
BS1
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
Curation History
The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. If you have questions about the information contained on this website, please see a health care professional.
¤ Powered by BCM's Genboree.