The ClinGen Evidence Repository is an FDA-recognized human genetic variant database containing expert-curated assertions regarding variants' pathogenicity and supporting evidence summaries. [Disclaimer]
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Variant: NM_000138.5(FBN1):c.8488C>T (p.Gln2830Ter)

CA10587783

263414 (ClinVar)

Gene: FBN1
Condition: Marfan syndrome
Inheritance Mode: Autosomal dominant inheritance
UUID: f50d8271-99cf-47c0-9551-31f31ed7c591
Approved on: 2024-08-22
Published on: 2024-08-22

HGVS expressions

NM_000138.5:c.8488C>T
NM_000138.5(FBN1):c.8488C>T (p.Gln2830Ter)
NC_000015.10:g.48411118G>A
CM000677.2:g.48411118G>A
NC_000015.9:g.48703315G>A
CM000677.1:g.48703315G>A
NC_000015.8:g.46490607G>A
NG_008805.2:g.239671C>T
ENST00000559133.6:c.*1296C>T
ENST00000674301.2:c.*2001C>T
ENST00000682158.1:n.1869C>T
ENST00000682170.1:n.2669C>T
ENST00000682767.1:n.1785C>T
ENST00000316623.10:c.8488C>T
ENST00000674301.1:c.3654C>T
ENST00000316623.9:c.8488C>T
ENST00000559133.5:c.3857C>T
NM_000138.4:c.8488C>T

Likely Pathogenic

Met criteria codes 3
PM2_Supporting PP4 PVS1_Strong
Not Met criteria codes 1
PS4

Evidence Links 0

Expert Panel

Criteria Specification Information

Criteria Specifications for this VCEP
Evidence submitted by expert panel
FBN1 VCEP
The NM_00138 c.8488C>T, is a nonsense variant in FBN1 that occurs in the last exon of the gene and is not expected to undergo nonsense-mediated decay but is expected to disrupt the last 42 amino acids of the protein. Premature terminations in the C-terminus are considered to be deleterious (PVS1_Strong; PMID 24982166, 12161601, 7911051, 21034599). This variant was found in a proband with thoracic aortic dissection and a systemic score >7, which is a highly specific phenotype for Marfan syndrome (MFS) (Internal lab data, PMID 29875124, PP4). This variant has been reported twice in ClinVar, once as pathogenic and once as uncertain significance (Variation ID: 263414). This variant is not present in gnomAD (PM2_sup; https://gnomad.broadinstitute.org/ v2.1.1). In summary, this variant meets criteria to be classified as likely pathogenic for Marfan syndrome based on the ACMG/AMP criteria applied, as specified by the ClinGen FBN1 VCEP: PVS1_Strong, PM2_Sup, PP4
Met criteria codes
PM2_Supporting
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
PP4
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
PVS1_Strong
PTC at 2830- not predicted to undergo NMD (WT stop codon at 2872)
Not Met criteria codes
PS4
No code specific comments provided, please refer to the summary above or general recommendations provided in the guideline
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